1,094 research outputs found

    Evaluating the effect of different wheat rust disease symptoms on vegetation indices using hyperspectral measurements

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    © 2014 by the authors. Spectral Vegetation Indices (SVIs) have been widely used to indirectly detect plant diseases. The aim of this research is to evaluate the effect of different disease symptoms on SVIs and introduce suitable SVIs to detect rust disease. Wheat leaf rust is one of the prevalent diseases and has different symptoms including yellow, orange, dark brown, and dry areas. The reflectance spectrum data for healthy and infected leaves were collected using a spectroradiometer in the 450 to 1000 nm range. The ratio of the disease-affected area to the total leaf area and the proportion of each disease symptoms were obtained using RGB digital images. As the disease severity increases, so does the scattering of all SVI values. The indices were categorized into three groups based on their accuracies in disease detection. A few SVIs showed an accuracy of more than 60% in classification. In the first group, NBNDVI, NDVI, PRI, GI, and RVSI showed the highest amount of classification accuracy. The second and third groups showed classification accuracies of about 20% and 40% respectively. Results show that few indices have the ability to indirectly detect plant disease

    Developing two spectral disease indices for detection of wheat leaf rust (Pucciniatriticina)

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    Spectral vegetation indices (SVIs) have been widely used to detect different plant diseases. Wheat leaf rust manifests itself as an early symptom with the leaves turning yellow and orange. The sign of advancing disease is the leaf colour changing to brown while the final symptom is when the leaf becomes dry. The goal of this work is to develop spectral disease indices for the detection of leaf rust. The reflectance spectra of the wheat's infected and non-infected leaves at different disease stages were collected using a spectroradiometer. As ground truth, the ratio of the disease-affected area to the total leaf area and the fractions of the different symptoms were extracted using an RGB digital camera. Fractions of the various disease symptoms extracted by the digital camera and the measured reflectance spectra of the infected leaves were used as input to the spectral mixture analysis (SMA). Then, the spectral reflectance of the different disease symptoms were estimated using SMA and the least squares method. The reflectance of different disease symptoms in the 450~1000 nm were studied carefully using the Fisher function. Two spectral disease indices were developed based on the reflectance at the 605, 695 and 455 nm wavelengths. In both indices, the R2 between the estimated and the observed was as highas 0.94. © 2014 by the authors; licensee MDPI, Basel, Switzerland

    Impact of bidirectional reflectance distribution function on modis vegetation indices in southeast Asia tropical forests

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    Copyright © 2017 ISRS, All Rights Reserved. Tropical forests play important roles on global climate and biodiversity. The Moderate Resolution Imaging Spectroradiometer (MODIS), with high temporal resolution, provide a useful tool to study tropical forest dynamics, including seasonality and inter-annual variation. However, optical satellite data have cloud, aerosol and bidirectional reflectance distribution function (BRDF) effects, that create uncertainty in tropical forest studies. In the Amazon, some researchers demonstrated the difficulties in separating true forest dynamics from BRDF artefacts and seasonal cloud and aerosol influences. Lastly, optical reflectance saturation in dense tropical forests may restrict the retrieval of phenology information. In this study, we investigated the impact of BRDF effects on MODIS vegetation indices (VI) in Southeast Asia (SEA) tropical forests, the least studied area compared to other major tropical forests (South America and Central Africa). Moreover, unlike Amazon tropical forests, VI seasonality in SEA forests is not synchronous with sun-sensor geometries. We used 10-year data of daily MODIS BRDF (MCD43A1) collection 6 product, a kernel-driven model product that allows us to retrieve VI values for a range of fixed solar zenith angles (SZA). We compared these with the standard VI products (MOD13A1, MYD13A1) to analyse BRDF influences. The results show significant BRDF effects in all forest sites. Generally, smaller SZA yielded higher VI signals in forests. We found tradeoff's between VI robustness to BRDF effects and saturation that impacted upon the retrievals of phenology parameters

    Modelling the number of olive groves in Spanish municipalities

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    The univariate generalized Waring distribution (UGWD) is presented as a new model to describe the goodness of fit, applicable in the context of agriculture. In this paper, it was used to model the number of olive groves recorded in Spain in the 8,091 municipalities recorded in the 2009 Agricultural Census, according to which the production of oil olives accounted for 94% of total output, while that of table olives represented 6% (with an average of 44.84 and 4.06 holdings per Spanish municipality, respectively). UGWD is suitable for fitting this type of discrete data, with strong left-sided asymmetry. This novel use of UGWD can provide the foundation for future research in agriculture, with the advantage over other discrete distributions that enables the analyst to split the variance. After defining the distribution, we analysed various methods for fitting the parameters associated with it, namely estimation by maximum likelihood, estimation by the method of moments and a variant of the latter, estimation by the method of frequencies and moments. For oil olives, the chi-square goodness of fit test gives p-values of 0.9992, 0.9967 and 0.9977, respectively. However, a poor fit was obtained for the table olive distribution. Finally, the variance was split, following Irwin, into three components related to random factors, external factors and internal differences. For the distribution of the number of olive grove holdings, this splitting showed that random and external factors only account about 0.22% and 0.05%. Therefore, internal differences within municipalities play an important role in determining total variability.This research is financed by Vice-Rector’s Office for Political Science and Research-University of Granada, through the project “Social-Labour Statistics and Demography” (30.BB.11.1101) at the Faculty of Labour Sciences

    Enfermedad de Chagas en Nicaragua

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    LA ENFERMEDAD DE CHAGAS ES UN PROBLEMA DE SALUD pública en toda Latinoamérica; alrededor de 20 millones de personas están infectadas y 200 millones están en riesgo de contraer la enfermedad. En 2006, la prevalencia en Centroamérica era del 7%. Actualmente no existe vacuna contra el protozoo y el tratamiento disponible resulta, aparte de poco efectivo, muy tóxico para el paciente. Los programas de control de vectores han ayudado a reducir los índices de infestación en Latinoamérica, pero aún falta mucho por hacer. En Nicaragua, la enfermedad de Chagas está subvalorada y los trabajos publicados son muy pocos. Es necesario investigar sobre esta enfermedad en nuestro país con otro enfoque, uno que no subvalore la enfermedad y ayude a desarrollar métodos diagnósticos y posibles tratamientos. Este artículo recopila información sobre los trabajos realizados porlos grupos más importantes de investigación en Chagas de Nicaragua en cuanto a epidemiología, control vectorial, diagnóstico y caracterización molecular

    Terrestrial carbon sinks for the United States Predicted from MODIS satellite data and ecosystem modeling

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    A simulation model based on satellite observations of monthly vegetation cover from the Moderate Resolution Imaging Spectroradiometer (MODIS) was used to estimate monthly carbon fluxes in terrestrial ecosystems of the conterminous United States over the period 2001-04. Predicted net ecosystem production (NEP) flux for atmospheric CO2 in the United States was estimated as annual net sink of about +0.2 Pg C in 2004. Regional climate patterns were reflected in the predicted annual NEP flux from the model, which showed extensive carbon sinks in ecosystems of the southern and eastern regions in 2003-04, and major carbon source fluxes from ecosystems in the Rocky Mountain and Pacific Northwest regions in 2003-04. As demonstrated through tower site comparisons, net primary production (NPP) modeled with monthly MODIS enhanced vegetation index (EVI) inputs closely resembles both the measured high- and low-season carbon fluxes. Modeling results suggest that the capacity of the NASA Carnegie Ames Stanford Approach (CASA) model to use 8-km resolution MODIS EVI data to predict peak growing season uptake rates of CO2 in irrigated croplands and moist temperate forests is strong

    Mangrove phenology and environmental drivers derived from remote sensing in Southern Thailand

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    © 2019 by the authors. Vegetation phenology is the annual cycle timing of vegetation growth. Mangrove phenology is a vital component to assess mangrove viability and includes start of season (SOS), end of season (EOS), peak of season (POS), and length of season (LOS). Potential environmental drivers include air temperature (Ta), surface temperature (Ts), sea surface temperature (SST), rainfall, sea surface salinity (SSS), and radiation flux (Ra). The Enhanced vegetation index (EVI) was calculated from Moderate Resolution Imaging Spectroradiometer (MODIS, MOD13Q1) data over five study sites between 2003 and 2012. Four of the mangrove study sites were located on the Malay Peninsula on the Andaman Sea and one site located on the Gulf of Thailand. The goals of this study were to characterize phenology patterns across equatorial Thailand Indo-Malay mangrove forests, identify climatic and aquatic drivers of mangrove seasonality, and compare mangrove phenologies with surrounding upland tropical forests. Our results show the seasonality of mangrove growth was distinctly different from the surrounding land-based tropical forests. The mangrove growth season was approximately 8-9 months duration, starting in April to June, peaking in August to October and ending in January to February of the following year. The 10-year trend analysis revealed significant delaying trends in SOS, POS, and EOS for the Andaman Sea sites but only for EOS at the Gulf of Thailand site. The cumulative rainfall is likely to be the main factor driving later mangrove phenologies

    Abrupt shifts in phenology and vegetation productivity under climate extremes

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    ©2015. American Geophysical Union. All Rights Reserved. Amplification of the hydrologic cycle as a consequence of global warming is predicted to increase climate variability and the frequency and severity of droughts. Recent large-scale drought and flooding over numerous continents provide unique opportunities to understand ecosystem responses to climatic extremes. In this study, we investigated the impacts of the early 21st century extreme hydroclimatic variations in southeastern Australia on phenology and vegetation productivity using Moderate Resolution Imaging Spectroradiometer Enhanced Vegetation Index and Standardized Precipitation-Evapotranspiration Index. Results revealed dramatic impacts of drought and wet extremes on vegetation dynamics, with abrupt between year changes in phenology. Drought resulted in widespread reductions or collapse in the normal patterns of seasonality such that in many cases there was no detectable phenological cycle during drought years. Across the full range of biomes examined, we found semiarid ecosystems to exhibit the largest sensitivity to hydroclimatic variations, exceeding that of arid and humid ecosystems. This result demonstrated the vulnerability of semiarid ecosystems to climatic extremes and potential loss of ecosystem resilience with future mega-drought events. A skewed distribution of hydroclimatic sensitivity with aridity is of global biogeochemical significance because it suggests that current drying trends in semiarid regions will reduce hydroclimatic sensitivity and suppress the large carbon sink that has been reported during recent wet periods (e.g., 2011 La Niña)

    Water loss due to increasing planted vegetation over the Badain Jaran Desert, China

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    © 2018 by the authors. Water resources play a vital role in ecosystem stability, human survival, and social development in drylands. Human activities, such as afforestation and irrigation, have had a large impact on the water cycle and vegetation in drylands over recent years. The Badain Jaran Desert (BJD) is one of the driest regions in China with increasing human activities, yet the connection between human management and the ecohydrology of this area remains largely unclear. In this study, we firstly investigated the ecohydrological dynamics and their relationship across different spatial scales over the BJD, using multi-source observational data from 2001 to 2014, including: total water storage anomaly (TWSA) from Gravity Recovery and Climate Experiment (GRACE), normalized difference vegetation index (NDVI) from Moderate Resolution Imaging Spectroradiometer (MODIS), lake extent from Landsat, and precipitation from in situ meteorological stations. We further studied the response of the local hydrological conditions to large scale vegetation and climatic dynamics, also conducting a change analysis of water levels over four selected lakes within the BJD region from 2011. To normalize the effect of inter-annual variations of precipitation on vegetation, we also employed a relationship between annual average NDVI and annual precipitation, or modified rain-use efficiency, termed the RUEmo. A focus of this study is to understand the impact of the increasing planted vegetation on local ecohydrological systems over the BJD region. Results showed that vegetation increases were largely found to be confined to the areas intensely influenced by human activities, such as croplands and urban areas. With precipitation patterns remaining stable during the study period, there was a significant increasing trend in vegetation greenness per unit of rainfall, or RUEmo over the BJD, while at the same time, total water storage as measured by satellites has been continually decreasing since 2003. This suggested that the increased trend in vegetation and apparent increase in RUEmo can be attributed to the extraction of ground water for human-planted irrigated vegetation. In the hinterland of the BJD, we identified human-planted vegetation around the lakes using MODIS observations and field investigations. Four lake basins were chosen to validate the relationship between lake levels and planted vegetation. Our results indicated that increasing human-planted vegetation significantly increased the water loss over the BJD region. This study highlights the value of combining observational data from space-borne sensors and ground instruments to monitor the ecohydrological dynamics and the impact of human activities on water resources and ecosystems over the drylands
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